PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023872035.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | NAC | ||||||||
Protein Properties | Length: 311aa MW: 35745.1 Da PI: 6.4201 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 172.7 | 1.1e-53 | 7 | 135 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPt+eelv +yL++k+++ k++l +vi+++d+yk+ePwd++ k+ e++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk+v XP_023872035.1 7 VPPGFRFHPTEEELVGYYLRRKINSLKIDL-DVIADIDLYKMEPWDIQDrcKLGYdEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAV 100 69****************************.9***************952433223677************************************ PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ls k++ +g++ktLvfykgrap+g+k+dW+mheyrl XP_023872035.1 101 LS-KNRIIGMRKTLVFYKGRAPNGRKSDWIMHEYRL 135 **.8999***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 311 aa Download sequence |
MEMESCVPPG FRFHPTEEEL VGYYLRRKIN SLKIDLDVIA DIDLYKMEPW DIQDRCKLGY 60 DEQNEWYFFS HKDKKYPTGT RTNRATAAGF WKATGRDKAV LSKNRIIGMR KTLVFYKGRA 120 PNGRKSDWIM HEYRLQTSEH GPLQEEGWVV CRAFKKPTPN YRQGFQAWNA YYVRDNCQVM 180 PPSYSHIAST TQAFNPNQAA TFHEPITSLQ QELVCNHTLL DNQLVELPRL DSPTLSTSLA 240 TKEGFQHNGI ANNEDFDGIS SQYVDWKNLD DLLASQFTGT TSYPNLPLIS QNNELGAQNN 300 DSHLLGCFPD L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71930.1 | 1e-109 | NAC family protein |