PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023870588.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family WRKY
Protein Properties Length: 310aa    MW: 34552.8 Da    PI: 8.543
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023870588.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.39e-30153212159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     ++Dgy+WrKYGqK+ +++++pr+Y++C++a +Cpvkkkv+rs ed+++++ tYegeHnh+
  XP_023870588.1 153 VKDGYQWRKYGQKVTRDNPCPRAYFKCSFApSCPVKKKVQRSVEDQSILVATYEGEHNHP 212
                     58***************************99****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MDYSSWRRST CLDLNVNVAS VPNEEMESNF IDFERKLSVK QETGALVEEL NRVSAENRKL  60
TEMLTVMCEN YNALRSQLMD YMSKNPEKEL SPSRKRKSES SNNINNNANG INGNSESSST  120
DDESCKKPRE GTIKAKISRS YVKTEASDTS LVVKDGYQWR KYGQKVTRDN PCPRAYFKCS  180
FAPSCPVKKK VQRSVEDQSI LVATYEGEHN HPHPSQLEAT SGSNRCVTLA SLPCSASLSS  240
SGPTLTLELT KSKSSTNDIK PSKPKIDSPE IKQFLVEQMA SSLTKDPNFT AALVAAISGK  300
MLHQNQTEKW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
19398SRKRKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.18e-97WRKY family protein