PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023870287.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

WRKY

Protein Properties

Length: 230aa MW: 25985.6 Da PI: 7.8523

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023870287.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	103.3	1.4e-32	156	214	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vk+s +prsYYrCt+++C+vkk+ver +ed ++v++tYeg+Hnh+ XP_023870287.1 156 LDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKRVERLSEDCRMVITTYEGRHNHS 214 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 230 aa Download sequence
MKIMEEERGA PNYELQVSFS ATPQAIHDMG FVQFEDNQVL SFLAPSQSSQ MSQPLSGSVA 60 TTNTTTTATT GGTSNTNPTT MGFSHNDLVT RPSWNNDQVG TMDPKAVNDE SGTGNASDGN 120 NSWWRSSTSD KSKVKVRRKL REPRFCFQTR SDVDVLDDGY KWRKYGQKVV KNSLHPRSYY 180 RCTHNNCRVK KRVERLSEDC RMVITTYEGR HNHSPCDDSN SSEHECFTSF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	135	141	KVRRKLR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44745.1	1e-70	WRKY family protein