PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026461067.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 339aa    MW: 38343.5 Da    PI: 6.9015
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026461067.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.82.2e-09190237455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  XP_026461067.1 190 SHSLAERVRREKISERMKLLQSLVPGC----DKVTGKALMLDEIINYVQSLQ 237
                     8*************************9....555*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MAAYSYLHPT LFLDSANFLI QNSTTTTTNH HNPVMMMSAG SSFEEQACHD IINSNTSLSY  60
YPSSDNYQSL HDLVVFHNNQ ETSSGEENNS RSSSDTDQSL TTNDNNIHNQ ETKTTEKKRK  120
NTTANDRSSR EGSCLSSGVS KNLKEVKTKK QRKCVKVTTE EKKKESQKIE EPPTSGYIHV  180
RARRGQATDS HSLAERVRRE KISERMKLLQ SLVPGCDKVT GKALMLDEII NYVQSLQNQV  240
EFLSMKLASV NPIFYDYGVD LDALLVKSEK QNYSPASIPL PSNDQQYNSS ALYQQSHILP  300
NSFSQCNENN LLMDMDREQR ERASTIISQS LFNHLCSFQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1117153KKRKNTTANDRSSREGSCLSSGVSKNLKEVKTKKQRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.21e-53bHLH family protein