PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_026460963.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 326aa MW: 37026.7 Da PI: 9.3312 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 180.5 | 4.4e-56 | 11 | 138 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL++k+++++++ ++i++vd++k+ePwdLp+k+k +ekewyfFs rd+ky+tg r+nrat++gyWk+tgkdke++++ XP_026460963.1 11 LPPGFRFHPTDEELITYYLTNKISDSSFTG-KAITDVDLNKSEPWDLPAKAKMGEKEWYFFSLRDRKYPTGIRTNRATHAGYWKTTGKDKEIFDS 104 79*************************999.88***************99999****************************************98 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ vg+kktLvfykgrap+gekt+Wvmheyrl XP_026460963.1 105 aTSNMVGMKKTLVFYKGRAPRGEKTNWVMHEYRL 138 78888***************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 326 aa Download sequence |
MDGLVSKEES LPPGFRFHPT DEELITYYLT NKISDSSFTG KAITDVDLNK SEPWDLPAKA 60 KMGEKEWYFF SLRDRKYPTG IRTNRATHAG YWKTTGKDKE IFDSATSNMV GMKKTLVFYK 120 GRAPRGEKTN WVMHEYRLHP KTSFRTSKDE WVVCRVFQKT NSLKKYQPPV HQQHRTNPYS 180 FETGHSSLLP PMMQMDHFSG GRNYINNADL AEISRVLRGP QNMNIPMQTQ PSYPGCFTIS 240 GLNLNLGAPT TQQGFRPVPP QNHQMMNAHS MTTADGSSSV LTNNGHVVGG NSAAFSMDMN 300 TTMGNNHRFQ NMDPYAVDLE NYWPSC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G24430.2 | 1e-103 | NAC family protein |