PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026460930.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 365aa    MW: 41430.5 Da    PI: 6.3224
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026460930.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.71.5e-11163210455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L++l+P +    +k +sKa +L + ++Y++sLq
  XP_026460930.1 163 SHSLAERVRREKISERLKMLQSLVPGC----DKVNSKAHMLDEIINYVQSLQ 210
                     8*************************9....555*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 365 aa     Download sequence    
MAAFTFQPHF HLDSLFMSNN NYIINPIYFP SMQDSSLQIF DNNVQQKIEP GMSDKTTTDN  60
TPTSSIVVDL EGGDDQVINS QEKTNPSMEE KKRKNGSCLD SDIKQSKDVK QRSKPKRQKK  120
CEVEVKEEKK IKDDKKTKKK KDGDHNQTDY VHVRARRGQA SDSHSLAERV RREKISERLK  180
MLQSLVPGCD KVNSKAHMLD EIINYVQSLQ VQVEMLSMKL ACMNPTLYDF GMDVDGFFCH  240
ELQKPITSTL AAAASSPSPL PLTTAHQESM APAPTTTTTA PTEIANVVTP TFSSTSNDTT  300
LHENSVSFST IQQQEVQQQQ KLNDFSQVLL QQQEVPNNED LLCYMDYYHH HLHRQEGATS  360
LFFYE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
191132KKRKNGSCLDSDIKQSKDVKQRSKPKRQKKCEVEVKEEKKIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.27e-46bHLH family protein