PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026460816.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

AP2

Protein Properties

Length: 509aa MW: 56407.1 Da PI: 6.1975

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026460816.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	34.8	4.1e-11	180	236	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + ++ k + g ++ +++Aa+a++ a++k++g XP_026460816.1 180 SIYRGVTRHRWTGRYEAHLWDnSCR-RegQSrKGRQ-GGYDKEDKAARAYDLAALKYWG 236 57*****************5444.2455535555.7799999***********98 PP
2	AP2	47.3	5.3e-15	279	330	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_026460816.1 279 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 330 57**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 509 aa Download sequence
MDTSHQNWLG FSLSNAQYHE QTSSSPSVVP DHQQQQQFFQ TLNATSFPRD ENENDGSTNL 60 SMYNFDRKLE DFLGVSSTNN THESADNNSN KNNNSTNSST ADQYGIITYD SELKSIASSF 120 LRGYTTDNNH YQNPSLDHHD LETTNSTGTT TAMVAAPLPV EVTSDAVSKK SVDNFGQRTS 180 IYRGVTRHRW TGRYEAHLWD NSCRREGQSR KGRQGGYDKE DKAARAYDLA ALKYWGPTTS 240 TNFPVTNYEK EIEDMTNMTR QEFVASLRRK SSGFSRGASI YRGVTRHHQH GRWQARIGRV 300 AGNKDLYLGT FSTQEEAAEA YDIAAIKFRG LNAVTNFDMS RYDVKSIANS NLPIGGITGS 360 SSKTTKAIIN SDSISDDRSN DGGHSDDRDF SSTTLSFGLP IKQDPSSTDY WSLVNGSGQN 420 NGVTNILHQQ TSSHDQGNIT TGNMFFNGGF VHQLQQQEQQ CVMSSSSPMS YDGSAAGYGG 480 EWVLAQPPLV YQTGKPNLSV FQTPIYGME

Sequence ? help Back to Top

Protein Sequence Length: 509 aa Download sequence

MDTSHQNWLG FSLSNAQYHE QTSSSPSVVP DHQQQQQFFQ TLNATSFPRD ENENDGSTNL  60
SMYNFDRKLE DFLGVSSTNN THESADNNSN KNNNSTNSST ADQYGIITYD SELKSIASSF  120
LRGYTTDNNH YQNPSLDHHD LETTNSTGTT TAMVAAPLPV EVTSDAVSKK SVDNFGQRTS  180
IYRGVTRHRW TGRYEAHLWD NSCRREGQSR KGRQGGYDKE DKAARAYDLA ALKYWGPTTS  240
TNFPVTNYEK EIEDMTNMTR QEFVASLRRK SSGFSRGASI YRGVTRHHQH GRWQARIGRV  300
AGNKDLYLGT FSTQEEAAEA YDIAAIKFRG LNAVTNFDMS RYDVKSIANS NLPIGGITGS  360
SSKTTKAIIN SDSISDDRSN DGGHSDDRDF SSTTLSFGLP IKQDPSSTDY WSLVNGSGQN  420
NGVTNILHQQ TSSHDQGNIT TGNMFFNGGF VHQLQQQEQQ CVMSSSSPMS YDGSAAGYGG  480
EWVLAQPPLV YQTGKPNLSV FQTPIYGME

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57390.1	1e-135	AP2 family protein