PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026460448.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 390aa    MW: 44360.7 Da    PI: 4.677
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026460448.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.12.4e-113133531055
                     HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     r+RR+riN+++ +L+ l+P+      +K++ +++Le+Av+Y+k Lq
  XP_026460448.1 313 RKRRERINERLKTLQNLVPNG-----TKVDISTMLEEAVDYVKFLQ 353
                     9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 390 aa     Download sequence    
MESMGVMSDG ELINSYCGFF SNNEEAEFML QLLGNFSYTS EQQQPQQHQD EYPSLGNMST  60
PVTANYYPNH HHDEAETNDG GMIMRMPDNS YFCADIAYPH YENMSQVGNY SFNGNGDHVY  120
MQNNSYHDDH DNYYASDANA PILMSNNLSM DYVLVEDQEH VHGLTTNNFF PGHVMEETNN  180
TCLNEEMSNE SSLEAVDLHD QRFEAKAKSE IEEPAISTVE DKSNVELIGK RKKRTRVPRD  240
NQKNKRNVKS KKSRKQSPSS NDEEERQCSS GCSSEEDSNG SQEEPKESSV LNMNGKVRAS  300
RGSATDPQSL YARKRRERIN ERLKTLQNLV PNGTKVDIST MLEEAVDYVK FLQLQIKLLS  360
SDDLWMYAPI AYNGMNIGAL DHINKISQKQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1230255KRKKRTRVPRDNQKNKRNVKSKKSRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.18e-57bHLH family protein