PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026459364.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 390aa MW: 43333.7 Da PI: 6.442

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026459364.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.2	1.9e-18	42	89	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lv ++++G g+W+t ++ g++R++k+c++rw +yl XP_026459364.1 42 KGPWTPEEDQKLVSHIQLHGHGCWRTLPKLAGLNRCGKSCRLRWTNYL 89 79********************************************97 PP
2	Myb_DNA-binding	53	7.9e-17	95	140	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+ ++eE++++++++ lG++ W++Ia++++ gRt++++k++w++++ XP_026459364.1 95 KGKISQEEEDIILNLHSILGNK-WSAIAKHLP-GRTDNDIKNFWNTHM 140 6889****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 390 aa Download sequence
MGSFSFGKNE LMRGCSKQLI KINMGRYPPP PRDDENNNGI KKGPWTPEED QKLVSHIQLH 60 GHGCWRTLPK LAGLNRCGKS CRLRWTNYLS PDIKKGKISQ EEEDIILNLH SILGNKWSAI 120 AKHLPGRTDN DIKNFWNTHM KKKLIQMGFD PMTHRPINDL LTSLPQLIAL ASLKEFMDNS 180 NQLPYEELVS RLIQTEAVND MVKVQYIQCL LQSTMGISTN YPTSIADNIQ ALNLFMNSLS 240 SIKENSTSSM INSSSQLDNM VVPNNVHDFP AELHYNPGDN FQTSLNNSHC DIVSPGHGCS 300 DSALLNQGDE RTPKVSQGCL LSSFPDDQTH PTPTVAHNNG RSASSSLGES SDAWNTSTTA 360 SATTTNTIYG GEVPSLWPEL FSVEDLSFYP

Sequence ? help Back to Top

Protein Sequence Length: 390 aa Download sequence

MGSFSFGKNE LMRGCSKQLI KINMGRYPPP PRDDENNNGI KKGPWTPEED QKLVSHIQLH  60
GHGCWRTLPK LAGLNRCGKS CRLRWTNYLS PDIKKGKISQ EEEDIILNLH SILGNKWSAI  120
AKHLPGRTDN DIKNFWNTHM KKKLIQMGFD PMTHRPINDL LTSLPQLIAL ASLKEFMDNS  180
NQLPYEELVS RLIQTEAVND MVKVQYIQCL LQSTMGISTN YPTSIADNIQ ALNLFMNSLS  240
SIKENSTSSM INSSSQLDNM VVPNNVHDFP AELHYNPGDN FQTSLNNSHC DIVSPGHGCS  300
DSALLNQGDE RTPKVSQGCL LSSFPDDQTH PTPTVAHNNG RSASSSLGES SDAWNTSTTA  360
SATTTNTIYG GEVPSLWPEL FSVEDLSFYP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10280.1	1e-82	MYB family protein