PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026458181.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

SBP

Protein Properties

Length: 505aa MW: 55800.4 Da PI: 7.9775

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026458181.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	132.6	1.4e-41	193	269	1	77
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +CqvegC+ dl++ak+yhrrh+vCe hsk+p+v+v+gle+rfCqqCsrfh+l efDe+krsCrrrL++hn+rrrk+ XP_026458181.1 193 RCQVEGCDLDLTSAKDYHRRHRVCESHSKCPKVIVAGLERRFCQQCSRFHDLAEFDEKKRSCRRRLSDHNSRRRKPP 269 6**************************************************************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 505 aa Download sequence
MSSCSVMEWN TKTALQWDWE NLVMFSGKVN EIPNKTSQQP TDWGVEGDGG GIDNGCFYSP 60 SGGGRAGGHS GSDLGNGSSS KSSISASIDS SGKVGSSKSK FNFDTVEDST NHPARKRELG 120 RVEDTGSSPT VGVSVVGSGE PLIGLKLGKR TYFEDVCAGS LVKPSSYTVT PAATATAVTK 180 RSRASYQSMQ TPRCQVEGCD LDLTSAKDYH RRHRVCESHS KCPKVIVAGL ERRFCQQCSR 240 FHDLAEFDEK KRSCRRRLSD HNSRRRKPPP ESIHFSTGRL SSPFYDGRQQ MSFILNRVPL 300 VHTTYPAVNP TWERRTAKPE GVDAHHSPNN ELLNSISSIH RDSGRLLSFK DTSVEVVDQE 360 GLEASTLAAS NLDPTTDFRR ALSLLSRNSS WDSSGTDHPE PSSLNQLMHA NHTGIAQQQP 420 LQKPVIQQSS VPHGWPTAST TEYWHPSQQQ QPTVATSHFQ EQQQQQQQYP NSSQSQNNNS 480 SSHFQEFQLF KTPYENGFYS PNQLT

Sequence ? help Back to Top

Protein Sequence Length: 505 aa Download sequence

MSSCSVMEWN TKTALQWDWE NLVMFSGKVN EIPNKTSQQP TDWGVEGDGG GIDNGCFYSP  60
SGGGRAGGHS GSDLGNGSSS KSSISASIDS SGKVGSSKSK FNFDTVEDST NHPARKRELG  120
RVEDTGSSPT VGVSVVGSGE PLIGLKLGKR TYFEDVCAGS LVKPSSYTVT PAATATAVTK  180
RSRASYQSMQ TPRCQVEGCD LDLTSAKDYH RRHRVCESHS KCPKVIVAGL ERRFCQQCSR  240
FHDLAEFDEK KRSCRRRLSD HNSRRRKPPP ESIHFSTGRL SSPFYDGRQQ MSFILNRVPL  300
VHTTYPAVNP TWERRTAKPE GVDAHHSPNN ELLNSISSIH RDSGRLLSFK DTSVEVVDQE  360
GLEASTLAAS NLDPTTDFRR ALSLLSRNSS WDSSGTDHPE PSSLNQLMHA NHTGIAQQQP  420
LQKPVIQQSS VPHGWPTAST TEYWHPSQQQ QPTVATSHFQ EQQQQQQQYP NSSQSQNNNS  480
SSHFQEFQLF KTPYENGFYS PNQLT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	250	267	KKRSCRRRLSDHNSRRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43270.1	1e-45	SBP family protein