PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026457594.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GATA
Protein Properties Length: 274aa    MW: 30692.7 Da    PI: 7.7699
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026457594.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.95.9e-18198232135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++C + kTp+WR gp g+ktLCnaCG++y++ +l
  XP_026457594.1 198 CTHCLSEKTPQWRAGPLGPKTLCNACGVRYKSGRL 232
                     *******************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MESLDTAAWL VDDLLDFSGV EEEQQQVLNV KQEADEHKNN NTNSNITLSS SSSLPMDSKL  60
LKEEALPDIY DPNKENPDFF PLLEEELEWL SNENAFPSIE TFLPVKPNIV TKQQSPVLVK  120
PNKPESSSVS SGSSSTSSSG IMCCGTLQVP VRARSSRRRR RPSGFLDDHQ WSTIWSESSD  180
IEKKKKIKRP SITSGRKCTH CLSEKTPQWR AGPLGPKTLC NACGVRYKSG RLVPEYRPAC  240
SPTFTTELHS NSHKKVLEMR RLKQQMMLPS VDAG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1157188RRRRRPSGFLDDHQWSTIWSESSDIEKKKKIK
2158189RRRRRPSGFLDDHQWSTIWSESSDIEKKKKIK
3182190EKKKKIKRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24050.14e-38GATA family protein