PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026456826.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MYB_related | ||||||||
Protein Properties | Length: 541aa MW: 57458.5 Da PI: 4.9696 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 31.9 | 3.1e-10 | 199 | 243 | 1 | 44 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHH..HHTTTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIar..tmgkgRtlkqcksrw 44 r++WT eEd l+ avk+lG ++W+ I + g Rt+ q+ rw XP_026456826.1 199 RKPWTLEEDNELIAAVKKLGERNWANILKadFKG-DRTASQLSQRW 243 789************************7621455.89999988888 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 541 aa Download sequence |
MASSNNTKRR KGLISEEDIA SLLKRYSAPT ILAVLKEVAQ FPDVKIDWNV LVTKSATGIS 60 NAWEYQMLWR HLAYCSVLPE TVEEKPEPLD DDSDLEYELE TFPPASDEAS LEAAACVKVL 120 LASGLPDDAG GPATVEAPLT INIPSLQDSK SPSDNPQPSR INITFPVSVQ KQSSPAVTTA 180 EGLDGTGPSA GSQPARRKRK PWTLEEDNEL IAAVKKLGER NWANILKADF KGDRTASQLS 240 QRWSIIRKRN SANLETVGGS GSQSELTEQQ LATRRAVSIA LNMPMNSSLS AACAVEAATG 300 SSQQIPLQTA LSLPKGTSSV TTKPRGTTKK AASVVPNPMI QAAAVAAGAR IATPSTAKSL 360 LKAAQSKSAV HISTIGKSSI PGLSPAMKDK VPLVSAVTSA STLCGTTAAG KKTNGVTSVV 420 VGNSSKEEKV QSSPNEDEVK NSPKEVVKTS SIDSEIKNSS NEEGVKNSSN EQPVKPEEME 480 IDCAADIAKY GKQQDQAALP DPDMVIEDVM TQNLSKLPDE EAAVSDPMQL DNHHIENEKE 540 N |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G09710.1 | 9e-71 | MYB_related family protein |