PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026456808.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GATA
Protein Properties Length: 397aa    MW: 44608.9 Da    PI: 5.6749
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026456808.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA51.81.1e-16242278135
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     Cs+Cgt++  Tp +Rrgp g++tLCnaCGl+++ kg+
  XP_026456808.1 242 CSHCGTSEssTPAMRRGPAGPRTLCNACGLMWANKGT 278
                     **********************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 397 aa     Download sequence    
MVPVDRYSDD DDLEDMMPPE NPLPLQARRF DDHMIPTDDE EDDDHHHDHD HDRRRDDDED  60
DEDDYDGGGG GDETEDDLQD IPVNSGGNFR NASTRTRTSE LTLAFEGEVY VFPSITYEKV  120
QAVLLLLGGR DIPTAVPAVD VSYHQNDGVF NAASDAPRRS NLSKRIDSLV KFREKRKERN  180
FDKKIRYNVP KEVSPKMHRK KGQFASSKQA KQGRVNSSSR DSSQFVLQGD MTPRSEVGSR  240
RCSHCGTSES STPAMRRGPA GPRTLCNACG LMWANKGTLR DLSKGGKTPL SFQNGQGTRK  300
DTKALPTDTR DLSPDLDEEG TPEGVHRGAS YGDMDELGSP DDLKPLRKIR NSYADSDQEF  360
FEDYTKPLAF HMKKSSAKRK EPSFYRPTNS STRRKNG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.12e-66GATA family protein