PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026456541.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

HD-ZIP

Protein Properties

Length: 276aa MW: 31390 Da PI: 6.3748

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026456541.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	43	8e-14	86	157	2	56
T--SS--HHHHHHHHHHHH.................HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFe.................knrypsaeereeLAkklgLterqVkvWFqNrRakek 56 r++t++++eq+++Le+ F+ ++ ++ +++ +L+++lgL rqV +WFqNrRa+ k XP_026456541.1 86 RRKTRLSSEQVDALEKSFQeeieleqqsgatlderkNKVKLEPDRKMKLSRELGLHPRQVAIWFQNRRARLK 157 7899***************************997799*****************************88 PP
2	HD-ZIP_I/II	90	2.9e-29	122	194	20	92
HD-ZIP_I/II 20 eeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ++ kLep+rK++l+reLgl+prqva+WFqnrRAR k k++E+ y++Lk+ ++ +++en++L++ev +L+++l+ XP_026456541.1 122 NKVKLEPDRKMKLSRELGLHPRQVAIWFQNRRARLKGKKIEELYNVLKQDFEIVSKENQSLKEEVMKLKSKLD 194 455******************************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 276 aa Download sequence
MANWSDCSST TPQIPSATSG TSGGEQQNYV SFVHDHQYLY ESFGHPFPGF VGAEMMKLWS 60 RSAYDCGAEN GVGGYDANIN NQVETRRKTR LSSEQVDALE KSFQEEIELE QQSGATLDER 120 KNKVKLEPDR KMKLSRELGL HPRQVAIWFQ NRRARLKGKK IEELYNVLKQ DFEIVSKENQ 180 SLKEEVMKLK SKLDDRESMR ASRRYIAQVW LHDKVVADST NTGISAAIQS INEVRQGRTN 240 NPNDIPGSSG YLFGEDYSST MLLPYWDVPN CYPSSQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36610.1	4e-34	HD-ZIP family protein