PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026454164.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 663aa MW: 76274.7 Da PI: 7.1714

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026454164.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	67.5	3.3e-21	55	148	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 +fY+e+Ak++GFs+r+++++ + + t+r fvC + g++ + ++++k +r+r+++r+gC+a ++++k+ ++w+vt + ++HnHel XP_026454164.1 55 EFYSEFAKRCGFSIRRHRTEGKdGVGKGLTRRYFVCHRAGNTPIKASSESKPQRNRKSSRCGCQAYMRISKNMdsgVAEWRVTGFTNHHNHELL 148 6************9998877356667999**********999999***************998666689***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 663 aa Download sequence
MMENYEDYSD QRSLSLDDAS SADESPHDIE LSLESSVDAT PYIGQRFVTH DAAYEFYSEF 60 AKRCGFSIRR HRTEGKDGVG KGLTRRYFVC HRAGNTPIKA SSESKPQRNR KSSRCGCQAY 120 MRISKNMDSG VAEWRVTGFT NHHNHELLQP NQVRFLPAYR TISETDKNRI FMFAKTGISV 180 QQMMRLMELE KCVEPGYLPF TEKDVRNLLQ ALKKIDQDDD SVDLLRMCRN IKDKDPNFRF 240 EYTLDVNERL ENIAWSYASS ILSYDIFGDA VVFDTTHRLT SFDMPLGIWV GMNNYGTPCF 300 FACVLLREEN TRSFSWALKA FLGFMNGKPP RTILTDQNVS LKDAIEMEMP RTKHALCIWF 360 IVAKFPSWFN AVLGERYNEW KNEFYRLYNM EMIEDFELGW GSMVNSFGLH TNRHISNLFA 420 LRTHWALPYL RDHFLAGMTT TGPSKSINAF IQRFLSAQTR LAHFVEQAAV AIDFKDQAGE 480 QQIMQQNLQN ILLKTGAPME AHAASVLTPY AFCKLQDELV LAAHYASFML EEGYFLVRHH 540 TEMEGGHKVI WNSQQGNISC GCRQFEFSGI LCRHALRVLS AMNCFQIPEP YLPIRWCRYY 600 NTVPSKTLQG GLSDYSDQVQ ALQSMVSNLI TESSKSKERL DLATEQVSVL LSRIREHPTS 660 AQR

Sequence ? help Back to Top

Protein Sequence Length: 663 aa Download sequence

MMENYEDYSD QRSLSLDDAS SADESPHDIE LSLESSVDAT PYIGQRFVTH DAAYEFYSEF  60
AKRCGFSIRR HRTEGKDGVG KGLTRRYFVC HRAGNTPIKA SSESKPQRNR KSSRCGCQAY  120
MRISKNMDSG VAEWRVTGFT NHHNHELLQP NQVRFLPAYR TISETDKNRI FMFAKTGISV  180
QQMMRLMELE KCVEPGYLPF TEKDVRNLLQ ALKKIDQDDD SVDLLRMCRN IKDKDPNFRF  240
EYTLDVNERL ENIAWSYASS ILSYDIFGDA VVFDTTHRLT SFDMPLGIWV GMNNYGTPCF  300
FACVLLREEN TRSFSWALKA FLGFMNGKPP RTILTDQNVS LKDAIEMEMP RTKHALCIWF  360
IVAKFPSWFN AVLGERYNEW KNEFYRLYNM EMIEDFELGW GSMVNSFGLH TNRHISNLFA  420
LRTHWALPYL RDHFLAGMTT TGPSKSINAF IQRFLSAQTR LAHFVEQAAV AIDFKDQAGE  480
QQIMQQNLQN ILLKTGAPME AHAASVLTPY AFCKLQDELV LAAHYASFML EEGYFLVRHH  540
TEMEGGHKVI WNSQQGNISC GCRQFEFSGI LCRHALRVLS AMNCFQIPEP YLPIRWCRYY  600
NTVPSKTLQG GLSDYSDQVQ ALQSMVSNLI TESSKSKERL DLATEQVSVL LSRIREHPTS  660
AQR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	0.0	FAR1 family protein