PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026453545.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 375aa MW: 42713 Da PI: 5.7284

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026453545.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.5	1.3e-17	17	64	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd ll+ ++kq+G+ +W++++ g+ R+ k+c++rw +yl XP_026453545.1 17 KGPWTPEEDHLLASYIKQHGPANWRSVPTNAGLLRCSKSCRLRWTNYL 64 79****************************99**********97 PP
2	Myb_DNA-binding	41	4.3e-13	70	115	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+ E++ ++ + ++G++ W++ a++++ Rt++++k++w+++l XP_026453545.1 70 RGNFTELEEKMIISLQSLWGNK-WAAMASHLP-QRTDNDIKNYWNTHL 115 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 375 aa Download sequence
MRNRPRCCCD EVLEIKKGPW TPEEDHLLAS YIKQHGPANW RSVPTNAGLL RCSKSCRLRW 60 TNYLRPEIKR GNFTELEEKM IISLQSLWGN KWAAMASHLP QRTDNDIKNY WNTHLKKKLM 120 KKFQSHHSGS SSPNFQFLNK DYSSNSFNRT RNLECDHHLN IHQTSALNKF INSITSSSTS 180 TPSSTTYASS TGNISRLLEG WVKTSPNKLS SSKLELKTNQ SEGKVVPSGS NNSDNNNHNT 240 SDNNLDDDEI FIKKVEEQET RYDDDAHLSN EADYFESLLT FENTSNVACW EQKSSPQSTK 300 IHGTTSASPE EAQTTTTTTT TTTIEDMVDS ILASDHQRLI EDDQNEPPFS VLEKWLLDEA 360 TQQVLEEDHM EECSN

Sequence ? help Back to Top

Protein Sequence Length: 375 aa Download sequence

MRNRPRCCCD EVLEIKKGPW TPEEDHLLAS YIKQHGPANW RSVPTNAGLL RCSKSCRLRW  60
TNYLRPEIKR GNFTELEEKM IISLQSLWGN KWAAMASHLP QRTDNDIKNY WNTHLKKKLM  120
KKFQSHHSGS SSPNFQFLNK DYSSNSFNRT RNLECDHHLN IHQTSALNKF INSITSSSTS  180
TPSSTTYASS TGNISRLLEG WVKTSPNKLS SSKLELKTNQ SEGKVVPSGS NNSDNNNHNT  240
SDNNLDDDEI FIKKVEEQET RYDDDAHLSN EADYFESLLT FENTSNVACW EQKSSPQSTK  300
IHGTTSASPE EAQTTTTTTT TTTIEDMVDS ILASDHQRLI EDDQNEPPFS VLEKWLLDEA  360
TQQVLEEDHM EECSN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G74650.1	2e-67	MYB family protein