PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026453127.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MYB | ||||||||
Protein Properties | Length: 293aa MW: 33788.5 Da PI: 4.8414 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 40.2 | 8e-13 | 18 | 65 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W +eEd +l+++++ +G g W+t++++ g+ R +k+c+ rw ++l XP_026453127.1 18 KGQWKPEEDMILKRYIETHGEGKWTTVSKKSGLMRGAKSCRMRWKNHL 65 799*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 48.5 | 2e-15 | 71 | 116 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg +++E +l+++ +k+lG++ W++Ia +++ gRt++++k++w+++l XP_026453127.1 71 RGQISEDEKDLIIRMHKLLGNR-WSLIAGRLP-GRTDNEVKNYWNTHL 116 67889*****************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 293 aa Download sequence |
MEKQENIYKK GENGIIKKGQ WKPEEDMILK RYIETHGEGK WTTVSKKSGL MRGAKSCRMR 60 WKNHLRPNIK RGQISEDEKD LIIRMHKLLG NRWSLIAGRL PGRTDNEVKN YWNTHLSRRN 120 LNQYQGHTVI PSAINCSKSR GLIQMEDPEK PLRGITSTHE NCIMDGILDD QGRLDAEADV 180 QSDNTTTTTI ETQPSSSEQR SDDNNGSTIL SDQSLVSGES DDTEGSTFPD FPMVDYNMIS 240 EDENFSLWLS NETIFYDVPL LPSYDYYFPV SYEPFEHNSD DDYCAWDKNL SWL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52600.1 | 2e-58 | MYB family protein |