PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026453125.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family LBD
Protein Properties Length: 231aa    MW: 25997.1 Da    PI: 8.5875
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026453125.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260107.51e-3317113196
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeee.redamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                     aCaaCk++r+kC+++C+l+p fp e+++kf++vhklFG+sn++kllk l++ + r++a++sl++eAear rdP++G +g ++k++ +l +l +++
  XP_026453125.1  17 ACAACKHQRKKCSQNCILSPFFPPEKKEKFQAVHKLFGVSNISKLLKGLHTLDeRKRAIDSLIWEAEARERDPIEGGFGAFKKINVELISLTNHV 111
                     7************************************************66554*******************************9998888776 PP

          DUF260  95 al 96 
                       
  XP_026453125.1 112 RI 113
                     65 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MDEKNDVIKA NNNPRQACAA CKHQRKKCSQ NCILSPFFPP EKKEKFQAVH KLFGVSNISK  60
LLKGLHTLDE RKRAIDSLIW EAEARERDPI EGGFGAFKKI NVELISLTNH VRISNQPGLP  120
KIGTNTISSD SKALMSWENS ANNGYAYGAY GNVSNVANNN YIPSNGRYNN INTNGYKEAE  180
RAFGYQGFSV LPHEQFHRQY FQSDQQNGVV NEKSDDSQSL VQEVMKDDPI L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06280.13e-31LBD family protein