PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026453005.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 262aa MW: 30129.6 Da PI: 6.5178

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026453005.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	44	5.2e-14	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W +eEd++l+++++ G g W+t++++ g+ R++k+c+ rw ++l XP_026453005.1 14 RGAWKPEEDLILKRYIEANGEGKWTTVSKKSGLMRSAKSCRMRWKNHL 61 89********************************************97 PP
2	Myb_DNA-binding	49.3	1.1e-15	70	112	4	48
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +++E++l+++ +k+lG++ W++Ia +++ gRt++++k++w+++l XP_026453005.1 70 ISEDEEDLIIRMHKLLGNR-WSLIAGRIP-GRTDNEVKNYWNTHL 112 699**************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 262 aa Download sequence
MKKQVCTNNE EFKRGAWKPE EDLILKRYIE ANGEGKWTTV SKKSGLMRSA KSCRMRWKNH 60 LRPNIKHGQI SEDEEDLIIR MHKLLGNRWS LIAGRIPGRT DNEVKNYWNT HLSKRNLNHQ 120 GQSMNSVTFN CKKRRNMVSD TNDIQQTLSI VSTKEQDESN IFNGSDERVD AQLSNPSSTT 180 STSSGAEEVK AVQRYADNSA AGDTAKIISE EEIYSCWLSD EPTFYVPFVP SLDYSILPFD 240 SLDNNYEDCW TNKLRLHDLV ED

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G52600.1	9e-56	MYB family protein