PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_026450261.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
|
||||||||
Family | MIKC_MADS | ||||||||
Protein Properties | Length: 246aa MW: 28733.5 Da PI: 8.4848 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 84.9 | 4.7e-27 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 +i+n + rqvtfskRrng++KKA+ELS+LCdaev +i+fsst+klye+ss XP_026450261.1 10 KIDNITSRQVTFSKRRNGLIKKAKELSILCDAEVGLIVFSSTDKLYEFSS 59 79**********************************************96 PP | |||||||
2 | K-box | 66.5 | 9.3e-23 | 90 | 182 | 8 | 97 |
K-box 8 s...leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 + +++++a+ +++e+a L+ + +nLq+ +++G++L sLs +eLq+Le+qLe sl+ + +K++ll+++i++l +k + l++en++L +k XP_026450261.1 90 NplmNASTEAKFWKREAATLRHQFQNLQEGYWQMMGQELCSLSANELQNLENQLELSLRGVHMQKDQLLTDEIRKLNQKRNLLRQENMELFNK 182 3456788999*******************************************************************************9877 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 246 aa Download sequence |
MGRGKIVIQK IDNITSRQVT FSKRRNGLIK KAKELSILCD AEVGLIVFSS TDKLYEFSST 60 RLNTLRSDQH RSILRMNSLL ERYDTSKEEN PLMNASTEAK FWKREAATLR HQFQNLQEGY 120 WQMMGQELCS LSANELQNLE NQLELSLRGV HMQKDQLLTD EIRKLNQKRN LLRQENMELF 180 NKEHHTRQEN LDLLRKINEA RDANETDRMS HSPNGFNLEE DIKVQLSQPQ QQNCDTPRGE 240 KATTLS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G37940.1 | 8e-69 | MIKC_MADS family protein |