PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026449530.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB_related

Protein Properties

Length: 550aa MW: 58414.7 Da PI: 5.3283

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026449530.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	31.9	3.2e-10	199	243	1	44
TSSS-HHHHHHHHHHHHHTTTT-HHHHHH..HHTTTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIar..tmgkgRtlkqcksrw 44 r++WT eEd l+ avk+lG ++W+ I + g Rt+ q+ rw XP_026449530.1 199 RKPWTLEEDNELIAAVKKLGERNWANILKadFKG-DRTASQLSQRW 243 789************************7621455.89999988888 PP

Sequence ? help Back to Top
Protein Sequence Length: 550 aa Download sequence
MASSNNSKRR KGLISEEDIA SLLKRYSAPT ILAVLKEVAQ FPDVKIDWNV LVKKSTTGIS 60 NAWEYQMLWR HLAYCGVLPE TVEEKPEPLD DDSDLEYELE TFPPASDEAS LEAAACVKVL 120 LASGLPDDAG GPATVEAPLT INIPSCQDSK SPSDNPQPSR INFTFPVSVQ KQSSPAVTTT 180 EGLDGTGPSA GSQPARRKRK PWTLEEDNEL IAAVKKLGER NWANILKADF KGDRTASQLS 240 QRWSIIRKRN SANLETVGGS GSQSELTEQQ LATRRAVSIA LNMPMNSSLS AACAVEAATG 300 SSQQIPLQTA LSLPKGTSSV TTKPRGTNKK AASVVPNPMI QAAAVAAGAR IATPSTAKSL 360 LKAAQSKSAV HISTAGKSSI PGLSPAMKDK VPLLSAVTSA STLCGTTAAG KKTNGVTSVV 420 VGNSSKEEKV QSSPNEDEVK NSPKEVVKTS SIDSKIKNSS SEEGVKNSSS EQLVKPEEME 480 IDCAADIAKY GKQQDQAALP DPDMVIEDVM MQNLSKLPDE EAAVSDPMQL DNHHIENEKE 540 NMRNSPAAAN

Sequence ? help Back to Top

Protein Sequence Length: 550 aa Download sequence

MASSNNSKRR KGLISEEDIA SLLKRYSAPT ILAVLKEVAQ FPDVKIDWNV LVKKSTTGIS  60
NAWEYQMLWR HLAYCGVLPE TVEEKPEPLD DDSDLEYELE TFPPASDEAS LEAAACVKVL  120
LASGLPDDAG GPATVEAPLT INIPSCQDSK SPSDNPQPSR INFTFPVSVQ KQSSPAVTTT  180
EGLDGTGPSA GSQPARRKRK PWTLEEDNEL IAAVKKLGER NWANILKADF KGDRTASQLS  240
QRWSIIRKRN SANLETVGGS GSQSELTEQQ LATRRAVSIA LNMPMNSSLS AACAVEAATG  300
SSQQIPLQTA LSLPKGTSSV TTKPRGTNKK AASVVPNPMI QAAAVAAGAR IATPSTAKSL  360
LKAAQSKSAV HISTAGKSSI PGLSPAMKDK VPLLSAVTSA STLCGTTAAG KKTNGVTSVV  420
VGNSSKEEKV QSSPNEDEVK NSPKEVVKTS SIDSKIKNSS SEEGVKNSSS EQLVKPEEME  480
IDCAADIAKY GKQQDQAALP DPDMVIEDVM MQNLSKLPDE EAAVSDPMQL DNHHIENEKE  540
NMRNSPAAAN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09710.1	4e-72	MYB_related family protein