PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026449140.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB_related

Protein Properties

Length: 463aa MW: 53059.9 Da PI: 10.0979

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026449140.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.7	2.3e-07	366	405	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +WT++E ++ +++G++ Wk+ a+ +g + + ++++ w+ XP_026449140.1 366 NWTEDEKAVVLKFYEKHGPD-WKSLAQILG--KNRHHVRDTWR 405 8***************88.******9..78899998887 PP

Sequence ? help Back to Top
Protein Sequence Length: 463 aa Download sequence
MDEEVILHKS EKKKHKRSKE KEALSSSEVP TEKKKLNRKK EVEMVNTSEV PSEKKKNKKS 60 KEKEILSTSE VPTEKKKHRK SKEKEALSSS ELPIDVGGEK KVKRSRDKDG FPDNGREESG 120 KRKDKKGKEK VTECSDVECA TDQAASKGKD HIDVGGEQNN ENAKNGKGKN KKRENANGGD 180 SGESCIEKSG AKAESGSCSS KKRNREEEVL DVAIGEEKKK KKKKTKLDAN IENTKANVGD 240 VETENNFGRM NEHLRTSCAK RVKFASHAEV FPSSDDQDDR EENLGNRLVQ GKRFTQKEDQ 300 IIKDAVHKYI EAHELDKEGL DMILNCRKHS KIITCWKEIG AALPYRPYKA VYERGVILFE 360 RSESRNWTED EKAVVLKFYE KHGPDWKSLA QILGKNRHHV RDTWRRISRA GLRKGKWTQT 420 EYQSLFHLVN KDLRMRMYEE KSSKHGLIRD NISWLVISSR LTT

Sequence ? help Back to Top

Protein Sequence Length: 463 aa Download sequence

MDEEVILHKS EKKKHKRSKE KEALSSSEVP TEKKKLNRKK EVEMVNTSEV PSEKKKNKKS  60
KEKEILSTSE VPTEKKKHRK SKEKEALSSS ELPIDVGGEK KVKRSRDKDG FPDNGREESG  120
KRKDKKGKEK VTECSDVECA TDQAASKGKD HIDVGGEQNN ENAKNGKGKN KKRENANGGD  180
SGESCIEKSG AKAESGSCSS KKRNREEEVL DVAIGEEKKK KKKKTKLDAN IENTKANVGD  240
VETENNFGRM NEHLRTSCAK RVKFASHAEV FPSSDDQDDR EENLGNRLVQ GKRFTQKEDQ  300
IIKDAVHKYI EAHELDKEGL DMILNCRKHS KIITCWKEIG AALPYRPYKA VYERGVILFE  360
RSESRNWTED EKAVVLKFYE KHGPDWKSLA QILGKNRHHV RDTWRRISRA GLRKGKWTQT  420
EYQSLFHLVN KDLRMRMYEE KSSKHGLIRD NISWLVISSR LTT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	121	128	KRKDKKGK
2	121	129	KRKDKKGKE
3	201	223	KKRNREEEVLDVAIGEEKKKKKK
4	218	224	KKKKKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41020.1	6e-64	MYB_related family protein