PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026448895.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GATA
Protein Properties Length: 353aa    MW: 39296.3 Da    PI: 5.2708
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026448895.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA56.15e-18247281135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C +C t kTp+WR gp g+ktLCnaCG++y++ +l
  XP_026448895.1 247 CLHCATDKTPQWRTGPLGPKTLCNACGVRYKSGRL 281
                     99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    
MEFMNGGYSC RAAQYTQEKR HAAADEKSST TDNQQFIIED LLDFSNEDAA AILDDNNIDG  60
TFDCIQNSSA DSSSVTTVVD SSCNSYGNDL NFSADFPDVP FSNDLCVPYD DLAELEWLST  120
FGEESFSSED LQKLQIISGI QTRPDEASEI RAEEYETKPN ISNINNPIFN PELPVPGKAR  180
SKRSRAAPNN WSSRLLVLSP TTSSSESDVF SNTTTASKKT MKVVVSRKRE FPDGSSIGNV  240
VGDGRKCLHC ATDKTPQWRT GPLGPKTLCN ACGVRYKSGR LVPEYRPASS PTFVQAKHSN  300
SHRKVLELRR KKEMDRSLQQ QFLYPNPGFN HVSNGDDYLI HHHSGPDYRQ QLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25830.12e-79GATA family protein