PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026448107.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family M-type_MADS
Protein Properties Length: 341aa    MW: 39570.7 Da    PI: 9.4516
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026448107.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF36.28e-121052244
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTS CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstg 44
                     i n  +r+ t+ kR+ g+ KK +E  vLC++ +++i++++++
  XP_026448107.1 10 LIANLKRRKETYQKRKIGLKKKLHEFTVLCNVPACMILYGPSQ 52
                    689999**********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MGRAKLDMKL IANLKRRKET YQKRKIGLKK KLHEFTVLCN VPACMILYGP SQGDRPVKVE  60
TWPPELDEVN NIIERYRQVP EENKQKRRQD LYDFFQERKK KAEADLGKLR KEHDEFQYFD  120
EQFKGLSVEQ LQQVLQRLGS KMESVDERIK HKKNQDMKGM SDQSNVAPFS MPNTSYEGNM  180
FSNNIQQQLD GSLYRPFFGG QGVSTDHHSQ YKKIKTNDYQ PCDNNSFMLN SAYMYANIPY  240
DPPMLSRGNT DFGYPVSSTF NVMPTSTLMP IPWSGSMHSA GYPSHYYQPP MHHGSSSSQG  300
PQRLFTMNSF PMSSGSTLRQ MSYPPEESFG IQDQPNRYRQ Q
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
186101KRRQDLYDFFQERKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58890.13e-17M-type_MADS family protein