PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026447507.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MYB_related
Protein Properties Length: 316aa    MW: 34272.3 Da    PI: 9.9076
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026447507.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.92.7e-14124168347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ +++ + ++lG+g+W+ I+r + ++Rt+ q+ s+ qky
   XP_026447507.1 124 AWTEEEHRIFLTGLEKLGKGDWRGISRNFVTTRTPTQVASHAQKY 168
                      7*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MARKCSHCGN MGHNSRTCSN YKGTNGGTGI GSGLKLFGVQ LDIHTSPPPP SSSSSSTSST  60
TSSPCFSSLI PMKKSFSMDC ISSSSASSSC RVFVNNNDDT ISHGGYLSDG LIARNHQERK  120
KGVAWTEEEH RIFLTGLEKL GKGDWRGISR NFVTTRTPTQ VASHAQKYFL RQTSLNKKKR  180
RSSLFDVIGS CSSSDDFSSL TLDANTVPQK SEVHQGFSIL QQPIVETHSP VKAATTRNDQ  240
DRSTRFSPSY TPVPLWGNVS FQPQPILPSF VTVPEFRTTT PNLELTLAAP RSLDQSQSST  300
TTTATRSLLT GPISVI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1177181KKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.13e-39MYB_related family protein