PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026446178.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

NAC

Protein Properties

Length: 388aa MW: 43878.2 Da PI: 6.827

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026446178.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	173.1	8.5e-54	29	156	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL+ kv + ++ i+evd++++ePw+Lp+ +k +e+ewyfFs rd+ky+tg r+nrat++gyWkatgkd+ev+s+ XP_026446178.1 29 LPPGFRFHPTDEELITFYLASKVFSGSFCG-IEIAEVDLNRCEPWELPEIAKMGEREWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREVYSA 122 79***********************877.56***********8888899**********************************99 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 +g+l g+kktLvfykgrap+gekt+Wvmheyrl XP_026446178.1 123 sNGALLGMKKTLVFYKGRAPRGEKTKWVMHEYRL 156 78899*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
MKMMLATMGG GGGDFLSEVH LDDVNEQGLP PGFRFHPTDE ELITFYLASK VFSGSFCGIE 60 IAEVDLNRCE PWELPEIAKM GEREWYFFSL RDRKYPTGLR TNRATEAGYW KATGKDREVY 120 SASNGALLGM KKTLVFYKGR APRGEKTKWV MHEYRLDGNF SYRHASSKEE WVICRIVHKP 180 GGEKKTPFYF AHHHHHNYLV EVASPLHQHH SSNTLPPLLE SPTKLLEAQP LQVFQEPYFM 240 NQDSDIGTLV NPASNPHQIV PNNMAVNSNN IQPFSSLSSN CSNNISSALF KSLLSHHQDC 300 MSKEEPSFHT KQFIKPDTNL NSYFQQLDGG ASNLNWLDKI QNQNPWQHSF SSSSSLSFET 360 GYGALGFCTD HPNTIQEMST SVAFSRAI

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

MKMMLATMGG GGGDFLSEVH LDDVNEQGLP PGFRFHPTDE ELITFYLASK VFSGSFCGIE  60
IAEVDLNRCE PWELPEIAKM GEREWYFFSL RDRKYPTGLR TNRATEAGYW KATGKDREVY  120
SASNGALLGM KKTLVFYKGR APRGEKTKWV MHEYRLDGNF SYRHASSKEE WVICRIVHKP  180
GGEKKTPFYF AHHHHHNYLV EVASPLHQHH SSNTLPPLLE SPTKLLEAQP LQVFQEPYFM  240
NQDSDIGTLV NPASNPHQIV PNNMAVNSNN IQPFSSLSSN CSNNISSALF KSLLSHHQDC  300
MSKEEPSFHT KQFIKPDTNL NSYFQQLDGG ASNLNWLDKI QNQNPWQHSF SSSSSLSFET  360
GYGALGFCTD HPNTIQEMST SVAFSRAI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76420.1	5e-98	NAC family protein