PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026445332.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 359aa MW: 40844.7 Da PI: 10.0886

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026445332.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	51.5	1.9e-16	195	284	5	98
-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 + +s+v+k +l +p kf+++ ++++ +++ tl +++g++++ k+ +++++ l++GW++F+ + +Lk gD+vvF+l++ + + +v ++r XP_026445332.1 195 MQKSHVSKGFWLNVPAKFCRSAKLPEDVETDFTLVNKEGKKFTTKF--IGSRNG--LSAGWRGFAIDEKLKKGDVVVFHLVEATARIIKVYIVR 284 66899***************99999999************..666655..9********************998887777777766 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MVGKQQLVTR RRRNPERNAL KKPKYEEDSS SESDQDAAAR PKKKQNASKK RPITEPKPLM 60 LAEETAHEID HDQTAGEVMP SGTASNEVKK IIVYERRRVK FNPLVVQLGE DGRDNLPLDD 120 MKIQDGVKLS RPNKSAAVHV SDQAAAARPK KMKNASKKRP INELKPPKPL TFEEVKAGEI 180 RSELDDDDRT TVILMQKSHV SKGFWLNVPA KFCRSAKLPE DVETDFTLVN KEGKKFTTKF 240 IGSRNGLSAG WRGFAIDEKL KKGDVVVFHL VEATARIIKV YIVRAPKQES DDDDDEEECE 300 EVLARKRNVR LKIMIQEQEL FKRRNDAIRR DREMYMKKLQ SPMSSQDDQV KSDLAAGSI

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MVGKQQLVTR RRRNPERNAL KKPKYEEDSS SESDQDAAAR PKKKQNASKK RPITEPKPLM  60
LAEETAHEID HDQTAGEVMP SGTASNEVKK IIVYERRRVK FNPLVVQLGE DGRDNLPLDD  120
MKIQDGVKLS RPNKSAAVHV SDQAAAARPK KMKNASKKRP INELKPPKPL TFEEVKAGEI  180
RSELDDDDRT TVILMQKSHV SKGFWLNVPA KFCRSAKLPE DVETDFTLVN KEGKKFTTKF  240
IGSRNGLSAG WRGFAIDEKL KKGDVVVFHL VEATARIIKV YIVRAPKQES DDDDDEEECE  300
EVLARKRNVR LKIMIQEQEL FKRRNDAIRR DREMYMKKLQ SPMSSQDDQV KSDLAAGSI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	1e-24	B3 family protein