PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026444287.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family C2H2
Protein Properties Length: 325aa    MW: 35267.1 Da    PI: 6.5977
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026444287.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.60.000836587123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C + F++   L  H+++H
  XP_026444287.1 65 YTCSFCAREFRSAQALGGHMNVH 87
                    9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    
METGSGTIME DAAKYWMWMN SKPVGDVRSS SNNVIVGEAN NWEERAFAVD SAGPLGGFVW  60
PPRSYTCSFC AREFRSAQAL GGHMNVHRRD RARLKESDHP PIYHYSPNNN NIHRAVDYNS  120
DGSIVSLLPL SSTQEIRDVN GAAGKTILLV SPSFAWSPTV VHENNYEQIK EVAGSTLFSQ  180
NLSQTADPVL VRVPSSSGSC SSSAVICQSA VKLDRDKSSS KANDIDILED ELAKEDSTAA  240
AGSGVSLSCN IDSNRRPTCS INIHRHVSST SNKRRRRDIQ PPSSLSQLMP AGGTAGSTSS  300
AFDKTNGLLH SYNSSMDELD LELRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37740.11e-25C2H2 family protein