PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026443665.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 303aa    MW: 32888.9 Da    PI: 5.7152
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026443665.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.12.1e-10182229455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  XP_026443665.1 182 SHSLAERARREKISERMRILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 229
                     8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MDHTTLISQG LFSSSTNNNN NSSFTSNNNN SSTGLAEIWP FSLGVGGGGG GGESSNGIFG  60
NSKKKHFLEH NLSGFGNQSN GVAEESTVTT DQSGRRNKRR DLGLNNKPTT SEDDGDDELT  120
KEMKDKRLKS SGSREDNGDV KSEMEASSGE GNKPAEQTEV KNEPPKQDFI HVRARRGQAT  180
DSHSLAERAR REKISERMRI LQDLVPGCNK VIGKALVLDE IINYIQSLQR QVEFLSMKLE  240
AVNSGPSPST EGFQFKDFGA QQAYETTGVV YGSQATREYI QGGSPSEWLH MQVGGGGGYE  300
RTA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.12e-71bHLH family protein