PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026443504.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | C2H2 | ||||||||
Protein Properties | Length: 223aa MW: 25136.6 Da PI: 8.9447 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 10.7 | 0.0017 | 55 | 70 | 1 | 16 |
EEETTTTEEESSHHHH CS zf-C2H2 1 ykCpdCgksFsrksnL 16 y+C+ C+k F++ L XP_026443504.1 55 YECKTCDKQFPSFQAL 70 99********997776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence |
MKEMMSNKRR GEMEESMAAT MTKCLMLLSR DRGEMDYQSV IQQKIMPSST QGRFYECKTC 60 DKQFPSFQAL GGHRASYKKP RLMELYSSDN HIINYNQQKA KKQKGHECSI CGLTFAIGQA 120 LGGHMRRHRA AMVESSATTA TAETTTTGLS SSSSDDTNIS FQEERLPQVP VLKRSNSSRR 180 VLSLNLDLSL SLLPYVSNDF EFSTIVNEDK HMPSSPSMIY SFI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G59820.1 | 1e-28 | C2H2 family protein |