PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026443059.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 456aa MW: 47146 Da PI: 6.6484

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026443059.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.9	6.3e-12	268	313	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR+ri +++ L+el+P+a K +Ka++L + ++Y+k Lq XP_026443059.1 268 HSIAERLRRERIAERMKALQELVPNA-----NKTDKASMLDEIIDYVKFLQ 313 99*********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 456 aa Download sequence
MASLRNCLTS SSSSQSSLQE QQQIQNSSNQ MQTGFDHPTN HDDFLDQMLC NLPSWSELKS 60 PWELNTSNSS QNPPKLFNIP IGGGKSENHS QENDNLHYPS CDDSTVLASR LRQHHIGNTS 120 PKSIVHLQQQ LLLAGGANGG GGMSRSPSTG SAMGGGGDPA LFPLPLTLGS NGGGGESSDD 180 APFKSSNSAG GGEGSVQALF NGIAGGISRS GSQQHFQSGS ISTPNFGGTQ ATGINQAPSA 240 GGSVSGGGVT APARQKVRAR RGQATDPHSI AERLRRERIA ERMKALQELV PNANKTDKAS 300 MLDEIIDYVK FLQLQVKVLS MSRLGGASAV APPAADISSE GDQGRSSNGA QNASNDSLSV 360 TEHQVAKLME EDMGSAMQYL QGKGLCLMPI SLATAISTAT AHSRHTTTNN PLLTSNVDGP 420 LSPNLSALTV QSATLGPGGL LPGGEAGKDV SSVSKP

Sequence ? help Back to Top

Protein Sequence Length: 456 aa Download sequence

MASLRNCLTS SSSSQSSLQE QQQIQNSSNQ MQTGFDHPTN HDDFLDQMLC NLPSWSELKS  60
PWELNTSNSS QNPPKLFNIP IGGGKSENHS QENDNLHYPS CDDSTVLASR LRQHHIGNTS  120
PKSIVHLQQQ LLLAGGANGG GGMSRSPSTG SAMGGGGDPA LFPLPLTLGS NGGGGESSDD  180
APFKSSNSAG GGEGSVQALF NGIAGGISRS GSQQHFQSGS ISTPNFGGTQ ATGINQAPSA  240
GGSVSGGGVT APARQKVRAR RGQATDPHSI AERLRRERIA ERMKALQELV PNANKTDKAS  300
MLDEIIDYVK FLQLQVKVLS MSRLGGASAV APPAADISSE GDQGRSSNGA QNASNDSLSV  360
TEHQVAKLME EDMGSAMQYL QGKGLCLMPI SLATAISTAT AHSRHTTTNN PLLTSNVDGP  420
LSPNLSALTV QSATLGPGGL LPGGEAGKDV SSVSKP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	273	278	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24260.1	4e-63	bHLH family protein