PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026441983.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 297aa    MW: 33486 Da    PI: 10.2336
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026441983.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.74.4e-13244290455
                     HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                     +h e+Er+RR+++N++f  Lr ++P+ +      K++Ka+ L  A+ YI +Lq
  XP_026441983.1 244 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAITYITELQ 290
                     799***********************66......*****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
CVRSFLSRSA GIQTTVLIPT DSGVIELGSV RSIPENSKML QLIRCMFTSN SAIRVKPITV  60
VPMMNEKKDE NGCHSNFAFR GRQDEYPKIF GQDLNLGRSQ IIDKPIVEKV EERPWDVYQN  120
GNGVSFQNNR KGGFRGMNWP QLRGMKPGTA TNSYSSQAPV NNQQKLGNSI LVMEDHRLNQ  180
IQSQNKQLPK HIDFSVGATS RGSLVTRPVE LEPADADEQS GPADERRPRK RGRKPANGRE  240
EPLNHVEAER QRREKLNQRF YALRAVVPNI SKMDKASLLG DAITYITELQ AKLKEME
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1226234RRPRKRGRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46510.18e-57bHLH family protein