PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026441354.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 389aa    MW: 42630.9 Da    PI: 4.7668
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026441354.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH383e-12184231254
                     HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     r +h e+Er+RR+++N+ f eLr+++P+       +++Ka+ L  +  YI++L
  XP_026441354.1 184 RLSHMEAERQRREKLNQLFYELRSVVPNV-----SRMDKASLLSDTLSYINEL 231
                     889*************************6.....49**************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 389 aa     Download sequence    
MENCSLLYAP SSSAISAPNS CSISTGSASI WLTTVLKELG DFPCERSNPD EAADHSFVLV  60
NDLISTSTIT EEMVNSGFSS SSDLEAAKSD LIQEKADKSL KGEVKHVSSF GVSDMDSLMC  120
SMNDYCSQQF GFEGNSSVVA DPNVCGLVVN DDDDGKIIDE ITTSPAPKNK NKRGRSNSSS  180
GGGRLSHMEA ERQRREKLNQ LFYELRSVVP NVSRMDKASL LSDTLSYINE LKRKVDKLEV  240
DQQAKIRKSK EGSVKLDNNN TTTMKEGSDE KIVDDEDLTG KTSSIDSVGG GRDDDMTLMK  300
NVEIDVKMMM DSHAMIRVIS EDVKLSSAGL MNALKELEFQ VQHASISRVK DQMLQDVMVR  360
LPENSVKTIS TEEGVKAAVF AKLKKQRFT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32640.14e-33bHLH family protein