PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026440530.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 357aa    MW: 39413.1 Da    PI: 8.1003
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026440530.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.31.2e-12119168355
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      +h  +Er+RR+++N+ ++ Lr+l+P     + k+ + a+i   +v+YIk++q
  XP_026440530.1 119 ISHITVERNRRKQMNEHLSVLRSLMPCF---YVKRGDQASIIGGVVDYIKEMQ 168
                     5899***********************9...9*******************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    
MDDNIIIPEF FDEYEFDDLF GILETLDNTT QDHILQVTLP LDEAVVIHGP TTNNTSPPSA  60
ALVSQKSISS SSSSFQLGLE PEFVDVPLAR TKKPKFSPGR KSASPTASED ILQDGQPKIS  120
HITVERNRRK QMNEHLSVLR SLMPCFYVKR GDQASIIGGV VDYIKEMQQV LQSLEAKRQR  180
KVYSEVLSPR VVVSSPRPNS LPLSPRKPPI SPRVSLPASP RTPTQTSPYK PRMQKQLTHL  240
SSSPTSHEPT SSISSSTLDN NILYVKEQLI PNPKSSPAKV EVKFAGPNVL LKTISARIPG  300
QATKIISTLE GLSLEILHVN INLVDSSTML NSFTIKIGIE CKLSVEELAH EVQQTFC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53210.17e-81bHLH family protein