PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026440373.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 475aa MW: 51889.7 Da PI: 4.7259

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026440373.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.7	1.5e-11	270	315	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR++i +++ +L+el+P+a + +K+++L + +eY+k Lq XP_026440373.1 270 HSIAERLRREKIADRMKNLQELVPNA-----SRADKSSMLDEIIEYVKFLQ 315 99*********************9.....79***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 475 aa Download sequence
MDEFLDQIFS SSSRPDVSTV ERSSWGRNGL AQNDGLLTDC LGMFEGGERN LPVNMPPSSQ 60 CMDKLATSYD FSKDLLTDEP QFLGEVFNRD IQSLYGAELV NAGNMNSSYM SMQSNMYLST 120 LDSLSRSSPE LVPVLWTTPS YGGVPSLPPV IEQDKLQGFG LQGDFVETDA NGFGIGDDKN 180 LNVRNFNSLT SAQEELNGLP FFVPNNQIPV ARTHSQMQLP QLSEGNPTAH YTDQNPVSQL 240 PHSSVTPGGG CNGDTKSRTR ARRGHATDPH SIAERLRREK IADRMKNLQE LVPNASRADK 300 SSMLDEIIEY VKFLQLQVKV LSMSRLGAAG AVVPLITDGQ PEGSGNLLLT GQEGDQSDSE 360 DNAAFEEELV KLMESNVTAA MQFLQTKGLC LMPIALAGAL SSKKEASSPD SSDKKKPYFT 420 NGHLPHNNNP PSANSNGHNF SPNGNTMQRQ NTVNNCFNKD VKQENTANAR VYRID

Sequence ? help Back to Top

Protein Sequence Length: 475 aa Download sequence

MDEFLDQIFS SSSRPDVSTV ERSSWGRNGL AQNDGLLTDC LGMFEGGERN LPVNMPPSSQ  60
CMDKLATSYD FSKDLLTDEP QFLGEVFNRD IQSLYGAELV NAGNMNSSYM SMQSNMYLST  120
LDSLSRSSPE LVPVLWTTPS YGGVPSLPPV IEQDKLQGFG LQGDFVETDA NGFGIGDDKN  180
LNVRNFNSLT SAQEELNGLP FFVPNNQIPV ARTHSQMQLP QLSEGNPTAH YTDQNPVSQL  240
PHSSVTPGGG CNGDTKSRTR ARRGHATDPH SIAERLRREK IADRMKNLQE LVPNASRADK  300
SSMLDEIIEY VKFLQLQVKV LSMSRLGAAG AVVPLITDGQ PEGSGNLLLT GQEGDQSDSE  360
DNAAFEEELV KLMESNVTAA MQFLQTKGLC LMPIALAGAL SSKKEASSPD SSDKKKPYFT  420
NGHLPHNNNP PSANSNGHNF SPNGNTMQRQ NTVNNCFNKD VKQENTANAR VYRID

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24260.1	9e-52	bHLH family protein