PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026440134.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 477aa    MW: 53388.3 Da    PI: 8.4459
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026440134.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B346.18.6e-1549136298
                     EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                     +k +++s+v +  +l l  kf+++  ++   ++++tl  e+g++++ ++    +  ++ l++GW++F+ a++L egD +vF+l++  +f  +v +
  XP_026440134.1  49 VKLMLRSHVVQGFWLGLTSKFCSRLPKN---DTEVTLVGEDGEEYTANY--LSH--KFGLSGGWRGFATAHKLVEGDALVFQLVEAAKF--KVYI 134
                     68999*****************988544...568***************..555..588***********************9876666..8887 PP

                     E- CS
              B3  97 fr 98 
                     +r
  XP_026440134.1 135 VR 136
                     76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 477 aa     Download sequence    
MKSSSAMVIA SGKKNDVRLM TEVEKPKSLV EVRAEEIQFG LDPQFPSLVK LMLRSHVVQG  60
FWLGLTSKFC SRLPKNDTEV TLVGEDGEEY TANYLSHKFG LSGGWRGFAT AHKLVEGDAL  120
VFQLVEAAKF KVYIVRAHSL ANVEVASSLL KSGIPAKGGD QADAEERKTG IKYTRKHILC  180
RPAVPLIGED QHTVPPLKSC KEMKMNKSPA QKHVKSHLSV PFLGDDQDAT LPIAGPKETT  240
ATDDPIRKRV KFHPSVLHLG GDQNVTLPLS SSKQPEDQSN RKVIDTEVLE GTKLSDSSVE  300
IQDVTDFESF TITVNGLIID PKMSENYRSK YYELCRSQKT YLHKNLMQGV NSKLVAGIIC  360
ETVDIADAIR ASELGTPKDD FKAWRKSLIG FKHLGMNADV LLSRIDILLK LVMDTEDSFD  420
KNETMVRRNR VKREIAALDM KILELRNESV RLEREVKALQ VNEEKHEAFY SVVRSPW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1427434RRNRVKRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.13e-35B3 family protein