PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026439580.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 281aa MW: 30645.3 Da PI: 8.5992

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026439580.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.2	6.8e-17	10	55	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W+ eEde+l ++v++ G ++W+ I+ ++ gR++k+c++rw + XP_026439580.1 10 KGSWSREEDEKLTKLVEENGARNWSVISLGIP-GRSGKSCRLRWCNQ 55 799***************************.*********985 PP
2	Myb_DNA-binding	55.4	1.4e-17	63	106	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++++ eEd ++++a++ +G++ W++Iar ++ gRt++ +k++w++ XP_026439580.1 63 KPFSLEEDSIIIKAHTVHGNK-WASIARLLP-GRTDNAVKNHWNST 106 689****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 281 aa Download sequence
MINTNGERIK GSWSREEDEK LTKLVEENGA RNWSVISLGI PGRSGKSCRL RWCNQLSPDV 60 KHKPFSLEED SIIIKAHTVH GNKWASIARL LPGRTDNAVK NHWNSTLRRR GYQLGSGGGV 120 SESASSSCSP DSDESAKKRQ CIRLPSSGSS LDDQNKCHDV GSGQIGNGLV TSLTLSPPGK 180 SESPVSDQVG VVVPRPPVAT GAYAGQNEVN VKEGEVRVKE EDREIERGRS LKGMKEMCLM 240 SIMQRMIAEE VRNYINRVSK SQGQGRGLNH DGLGVDADQD V

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50060.1	1e-51	MYB family protein