PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026436583.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

GRAS

Protein Properties

Length: 394aa MW: 44629.4 Da PI: 4.6415

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026436583.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	94.2	2.1e-29	228	392	2	164
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl.......fsevsP 89 +lLl+ Ae v++++++la++lL++ l+s +g+p++R++ y++e+L+ r+ r++ ++ l+ se +e++ +++ +a+ + +++ P XP_026436583.1 228 AQLLLASAELVNNKQFNLASRLLTQCDYLSSTTGNPVERVVYYYAEGLRDRIDRETGRIP--LKISEGREEQPIDVDKAMMTlnpallaCHQTLP 320 689*************************************************666665..45555555553333333322244666689 PP GRAS 90 ilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetger 164 + k+ +++ q+I++ v+++++vH iDf+i G+Q L+qaLasR + p l+iT+vg ++ +eetg+r XP_026436583.1 321 FGKVLQFAGIQTIVDNVASASKVHLIDFGIRIGMQGSVLMQALASRHQCPIeLLKITAVGT----LRQPIEETGKR 392 *******************************************6665499****9....77778888776 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
MMNAVFACEN YEFEGDREVY GDPTRIYEKK ESIVNRNELH PFSGYEDWEG INNLCTLDYG 60 SDHENTLQKG AWFPKDQEQL FSDFPMLDNF QLNMGFPPVH QSIITQDSIV FHSDMHEIPD 120 LVEEKKDKGK KENMCPISLT SLELLNNYTK RLKKLKDERR SNELQNEVEF TTVDNGGRLS 180 TEEAFRVAGA RFIQLSAKQE DDMIVITNQF DCSISSLSDE ESKDVELAQL LLASAELVNN 240 KQFNLASRLL TQCDYLSSTT GNPVERVVYY YAEGLRDRID RETGRIPLKI SEGREEQPID 300 VDKAMMTLNP ALLACHQTLP FGKVLQFAGI QTIVDNVASA SKVHLIDFGI RIGMQGSVLM 360 QALASRHQCP IELLKITAVG TLRQPIEETG KRSG

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

MMNAVFACEN YEFEGDREVY GDPTRIYEKK ESIVNRNELH PFSGYEDWEG INNLCTLDYG  60
SDHENTLQKG AWFPKDQEQL FSDFPMLDNF QLNMGFPPVH QSIITQDSIV FHSDMHEIPD  120
LVEEKKDKGK KENMCPISLT SLELLNNYTK RLKKLKDERR SNELQNEVEF TTVDNGGRLS  180
TEEAFRVAGA RFIQLSAKQE DDMIVITNQF DCSISSLSDE ESKDVELAQL LLASAELVNN  240
KQFNLASRLL TQCDYLSSTT GNPVERVVYY YAEGLRDRID RETGRIPLKI SEGREEQPID  300
VDKAMMTLNP ALLACHQTLP FGKVLQFAGI QTIVDNVASA SKVHLIDFGI RIGMQGSVLM  360
QALASRHQCP IELLKITAVG TLRQPIEETG KRSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66350.1	2e-13	GRAS family protein