PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026436008.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GATA
Protein Properties Length: 270aa    MW: 30092 Da    PI: 8.6087
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026436008.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA63.22.9e-20149183135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C+nC tt+TplWR+gp+g+k+LCnaCG++y+k+++
  XP_026436008.1 149 CANCDTTSTPLWRNGPRGPKSLCNACGIRYKKEER 183
                     ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MYRCTSSHCN QVGLCSCSLF HSSANNSFSM LFSPSNPNNA HYQYGNEVDD HQHQYYQYPT  60
PSSSSVDCTL SLGTPSTRQS KSNSNNSRNS ISKGRSSTSC IWDIFQTKKT IPPQTTTIKG  120
SRGGTSTNSG NNNSILSNIS GDSLLARRCA NCDTTSTPLW RNGPRGPKSL CNACGIRYKK  180
EERRASNNNA AAAQSSVMDQ QYIMSHQYSW PTHQQHTNQK LSSAHLGNEF MFVQEDDHHQ  240
YQRVSDSGIP FLSWRLNVPE RPGLVHDYTC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50870.12e-33GATA family protein