PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026435923.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GATA
Protein Properties Length: 273aa    MW: 30521.6 Da    PI: 8.2833
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026435923.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.95.9e-18197231135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++C + kTp+WR gp g+ktLCnaCG++y++ +l
  XP_026435923.1 197 CTHCLSEKTPQWRAGPLGPKTLCNACGVRYKSGRL 231
                     *******************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MESLDTAAWL VDDLLDFSGV EEEQQQVLNV KQEADEHKTN NTKSNITLSS SSSLPMDSKL  60
LKEEALPDIY DPNKENPDFF PLLEEELEWL SNENAFPSIE TFLPVKPNIV TKQQSPVLVK  120
PKPESSSVSS GSSSTSSSGI MCCGTLQVPV RARSSRRRRR PSGFLDGHQW STIWSESSDI  180
EKKKKIKRPS ITSGRKCTHC LSEKTPQWRA GPLGPKTLCN ACGVRYKSGR LVPEYRPACS  240
PTFTTELHSN SHKKVLEMRR LKQQMMLPSV DAG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1156187RRRRRPSGFLDGHQWSTIWSESSDIEKKKKIK
2157188RRRRRPSGFLDGHQWSTIWSESSDIEKKKKIK
3181189EKKKKIKRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24050.16e-38GATA family protein