PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026434069.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

LBD

Protein Properties

Length: 301aa MW: 33825.6 Da PI: 4.643

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026434069.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	127.7	5.3e-40	10	109	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 aCaaCk++rrkCa+dC+lapyfp++qpk f+n+h+lFG+sn++k+lk l ++ +++a++s++ye+++rar Pv+G+ gvi +lq ql+q++ el+ XP_026434069.1 10 ACAACKYQRRKCAPDCALAPYFPHDQPKMFQNAHRLFGVSNIQKILKPLTPNLKKEATRSIIYESNMRARFPVSGCQGVIIQLQYQLQQAELELH 104 7********************************************************************************************** PP DUF260 96 llkee 100 +++++ XP_026434069.1 105 YVRAH 109 99876 PP

Sequence ? help Back to Top
Protein Sequence Length: 301 aa Download sequence
MTVKGGTNHA CAACKYQRRK CAPDCALAPY FPHDQPKMFQ NAHRLFGVSN IQKILKPLTP 60 NLKKEATRSI IYESNMRARF PVSGCQGVII QLQYQLQQAE LELHYVRAHL EMYRQQNQIQ 120 TSPELLQLGN LNMAAAPTPA PDYNTLSLFQ QQAYDDNNVS VVNGDVASIM PMESFSNENS 180 QGYGNDVTPV DYVKNEIVNP LWMQHDFIAN DHHNGNNNSN STKVQSHEFF VEQPVLFQQE 240 PDVLESQDYD EMPAFFDAID DKEGYESSPE SSPGDATQSI EHVSENELKN AAACFSVTSV 300 N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47870.1	4e-37	LBD family protein