PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026433491.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 297aa    MW: 31767.3 Da    PI: 9.5416
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026433491.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.90.000211762141154
                     HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      R ++i ++++ L++l+ +      +K + a++L +A+ YI+ L
  XP_026433491.1 176 VRKEKIGERIAALQQLVSPF-----GKTDTASVLHEAMGYIRFL 214
                     6888999***********98.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MGTSESFDHE DSLSSYSQLL DSTSQDMEQS FMYSTFHSSP KPPTMLCFGN VNNNNTSISS  60
INSNKKKLDE ELGFVDRGNK VIQKSGITGG SDSSSASSSN NSSSSNSITK SKRGQIGNIK  120
QTEQEERENG YGSNNPIPVS GLGSSNNSQA TKRTTITTNK KPKKETPPSV GAPVKVRKEK  180
IGERIAALQQ LVSPFGKTDT ASVLHEAMGY IRFLHDQVQV LSSPYLQKLP LSGPFAEGGR  240
RAAAGIGTGL RSRGLCLVPI EYTLHVANCN GADLWSPAAA MGNINNFNNN TLAKNAN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19500.11e-37bHLH family protein