PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_026432158.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 204aa MW: 23354.7 Da PI: 9.7401 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 33.2 | 9.1e-11 | 27 | 79 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-.STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPk.askapskK.lsKaeiLekAveYIksLq 55 + +++Er+RR++++s +++L +ll + ++skK +s + L +A++YI +Lq XP_026432158.1 27 TERKIVERNRRNNMKSLYSQLNSLLIPqE--NSSKKlMSVPDQLCEATNYIGNLQ 79 66789******************987744..79999****************998 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 204 aa Download sequence |
MRSQKDMETS TSPTHNQKES ASSNTKTERK IVERNRRNNM KSLYSQLNSL LIPQENSSKK 60 LMSVPDQLCE ATNYIGNLQT RVERMKQQRE SLLVRSSTMN INNNVKPPPE ADMIPPIIEI 120 TIAGYALKVV LIASRIHNHQ SLFYELIRVL QEEERAEIVN ANFSIIDSVG MHTIHSQVGD 180 SELGFGVERV RRRLTKLVHE FVIL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G20970.1 | 4e-29 | bHLH family protein |