PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026430762.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 338aa MW: 37737.6 Da PI: 9.3153

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026430762.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	51.6	1.8e-16	27	112	2	95
EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 +kv++ s+v k +l +p kf+e+++ k +++tl de+g+ +++++i +k++ l++GWk+F +++L+ gD v+F+l++ ++f+ XP_026430762.1 27 IKVMLESHVVKGFWLGVPTKFCEAFMPK--VRIKMTLVDEKGKNYKLNYIPEKTG----LSGGWKGFSVDHKLRIGDAVLFQLVDLMTFKV--V 112 699*****************999744..4579***********544444....*********************987688843..3 PP

Sequence ? help Back to Top
Protein Sequence Length: 338 aa Download sequence
MGEATLSAKA RAEEIQSTLD PSIPSLIKVM LESHVVKGFW LGVPTKFCEA FMPKVRIKMT 60 LVDEKGKNYK LNYIPEKTGL SGGWKGFSVD HKLRIGDAVL FQLVDLMTFK VVIVKGNGVA 120 DTDGGQDIDD GLTLLQLKAR AQRRTPGDAC KELKRETKTV AKRQRVGAAG KNLKPEEKPA 180 EKRRRRAPSS VIHDENRSQK QPDDDNGDAV DSVVGDFESF TKIVKDLVGD SKLPEDVLEK 240 YYKLCCTHNS FLHANLLPGC NSNLVAGMII ATVEIVHGIR SCKLRDTLNG EVAVWKNKLE 300 AFEKLGMSVD FVFPRLNQLQ KLSEKALIRH QYQQMYPE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	5e-39	B3 family protein