PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026430336.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 230aa MW: 27034.9 Da PI: 8.0518 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 91.8 | 3.2e-29 | 30 | 79 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rien++ rqvtfskRrng+lKKA+ELSvLCd e+a+i+fsstgklye++s XP_026430336.1 30 RIENTTSRQVTFSKRRNGLLKKASELSVLCDGEIALIVFSSTGKLYEFCS 79 8***********************************************96 PP | |||||||
2 | K-box | 68.8 | 1.7e-23 | 95 | 178 | 8 | 91 |
K-box 8 sleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeen 91 + ++++++l+ e+ +L keienLq++qR+l+Ge+Les+sl eLq e+qLe sl +iR+kKn+l++eqie+l+++ qe++ XP_026430336.1 95 KEVQENSQQLKYEAVNLAKEIENLQTSQRKLMGESLESCSLDELQTAETQLEMSLLNIRTKKNQLYREQIEQLKQQHMTFQEDQ 178 334667899******************************************************************988888764 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence |
MKQHISFFRI SIFFGGETTI MGRGKTVMRR IENTTSRQVT FSKRRNGLLK KASELSVLCD 60 GEIALIVFSS TGKLYEFCST TSMQKTIERY QKYNKEVQEN SQQLKYEAVN LAKEIENLQT 120 SQRKLMGESL ESCSLDELQT AETQLEMSLL NIRTKKNQLY REQIEQLKQQ HMTFQEDQLL 180 EENEVLWEKR SGITHFYVEN KSLELRNIMI QRSMYLIDYN FDDVLAAKPH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45660.1 | 4e-61 | MIKC_MADS family protein |