PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026430129.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 406aa MW: 45765.2 Da PI: 8.6189

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026430129.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	51.1	2.4e-16	142	233	2	99
EEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 +k +++s+v + +l lpk+f+++h +++ e+ +++l de+g +++ + k+ + l++GWk F+ +++L++gD vv++l+g +f +v XP_026430129.1 142 VKSMVRSHVYSCFWLGLPKEFCDSHlSMDC-EKWEMVLVDEKGIEYDTIY--IPKRTG--LSGGWKAFALDHKLDDGDAVVLELTGPARF--KVY 229 6999*******************85554.4579***********..555544..*********************9986666..999 PP EE-S CS B3 96 vfrk 99 +fr XP_026430129.1 230 IFRV 233 9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 406 aa Download sequence
MAKGRTTTAN SYEEERKKQI EDNKKRLQEL GIAKVAKCLS DVANMEKQSP AAKPRIRKTP 60 TSPVEVRCSS RARNTVSYKE EFVDDHLRGN RFRSSSSLNT SYLGRPLEEI KVPTYEQRSD 120 TMERAGIFQS ELKRKSKYPS CVKSMVRSHV YSCFWLGLPK EFCDSHLSMD CEKWEMVLVD 180 EKGIEYDTIY IPKRTGLSGG WKAFALDHKL DDGDAVVLEL TGPARFKVYI FRVSDKWGEN 240 WGDVNIAEVK KPCTEDTTDE NISEEKIVES KAEGRRTHSL KRVKKSDADN KDADGSASEE 300 NDTVRRRTHN PKRLKKTDTD SGDSDGTMLE EKAVVETRVR GRTPNPEGAK KSDARDADID 360 ENTSEEKDVV GDPKATGRRT RKSQRVVKSS TAISASEGDG SLHNLL

Sequence ? help Back to Top

Protein Sequence Length: 406 aa Download sequence

MAKGRTTTAN SYEEERKKQI EDNKKRLQEL GIAKVAKCLS DVANMEKQSP AAKPRIRKTP  60
TSPVEVRCSS RARNTVSYKE EFVDDHLRGN RFRSSSSLNT SYLGRPLEEI KVPTYEQRSD  120
TMERAGIFQS ELKRKSKYPS CVKSMVRSHV YSCFWLGLPK EFCDSHLSMD CEKWEMVLVD  180
EKGIEYDTIY IPKRTGLSGG WKAFALDHKL DDGDAVVLEL TGPARFKVYI FRVSDKWGEN  240
WGDVNIAEVK KPCTEDTTDE NISEEKIVES KAEGRRTHSL KRVKKSDADN KDADGSASEE  300
NDTVRRRTHN PKRLKKTDTD SGDSDGTMLE EKAVVETRVR GRTPNPEGAK KSDARDADID  360
ENTSEEKDVV GDPKATGRRT RKSQRVVKSS TAISASEGDG SLHNLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58280.1	4e-49	B3 family protein