PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026429928.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 266aa    MW: 30453.8 Da    PI: 4.3898
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026429928.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B339.88.3e-1321104796
                     .-HHHHTT-EE--HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3   7 psdvlksgrlvlpkkfaeeh...ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                     ++d+++ ++l +p  f +e+      + ++   tl+++  +sW+vkl      + + +t+GW++F ka++L +g  + F+++g+ +  ++v v
  XP_026429928.1  21 HADSSSADQLAIPVAFEREYlvdR--EDSEGVATLKSPLKKSWKVKL------NDFKFTDGWEDFYKAHELSTGYYLAFQYQGH-DLIFRVWV 104
                     6789999*************9753..3344589**************......5678************************984.44334444 PP
2B353.93.2e-171852641798
                     E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
              B3  17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                      +p kfa+++ ++  e  t+ l de+ ++W +kl  +++s++  + +++GWk+F ++++Lk gD+++F+ +++++ e++v++++
  XP_026429928.1 185 AIPTKFAKSNILDDVE--TVFLIDEERKEWPIKL--TRRSDGygVHFGSGWKDFQSEKRLKKGDICLFEQKSEDKLEFTVSIIK 264
                     69********666445..8***************..66666656999**********************887799999999876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MERIGNLACP SSKPHFVHPI HADSSSADQL AIPVAFEREY LVDREDSEGV ATLKSPLKKS  60
WKVKLNDFKF TDGWEDFYKA HELSTGYYLA FQYQGHDLIF RVWVFTLSYC EVEYSTESLM  120
MSEGEDENEM DRAESVGTSK GNCECEGNGE IKSNGKGRKE PTSSDQVEVD SEESNVDDYD  180
ELEEAIPTKF AKSNILDDVE TVFLIDEERK EWPIKLTRRS DGYGVHFGSG WKDFQSEKRL  240
KKGDICLFEQ KSEDKLEFTV SIIKEI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26680.12e-26B3 family protein