PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026428680.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

bHLH

Protein Properties

Length: 216aa MW: 23917.6 Da PI: 10.1247

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026428680.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.8	7.9e-13	40	86	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h +E++RR+++N++f L ++P + kK++Ka++L Av+Y+ +Lq XP_026428680.1 40 EHVVAEKKRREKLNQRFIALSAIVPGL-----KKVDKASVLGDAVKYLTQLQ 86 6999*********************.....9****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 216 aa Download sequence
MLPSDVPCMN ANSASKQQGL KRKRTSTTAT MANNSHSTKE HVVAEKKRRE KLNQRFIALS 60 AIVPGLKKVD KASVLGDAVK YLTQLQEKVK TLEERTTKKT VESVIFLKKT QMFADENDSS 120 SSSENSVAGL INDETLPEIE ARVSHKNILI RIHCEKHTGV LVKILSQIEN LHLSIISSNA 180 IPFDDDSSLA ITITAQMNAK YSMTVKDLVK SLRSIV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	46	51	KKRREK
2	46	71	KKRREKLNQRFIALSAIVPGLKKVDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22770.1	4e-51	bHLH family protein