PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_026428182.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 231aa MW: 25999 Da PI: 8.567 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 13.3 | 0.00015 | 49 | 99 | 6 | 54 |
HHHHHHHHHHHHHHHHHHHCTSCCC.....TTS-STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkas..kapskKlsKaeiLekAveYIksL 54 +++E++RR +++ ++L +l + s K + L A eYIk+L XP_026428182.1 49 KIVEKNRRIQMKALCFKLVSLTTPKStiDYILDISPKTDQLDDAAEYIKEL 99 789******************998543544444567999**********99 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 231 aa Download sequence |
MVELAFPCQY FMLSPNYNSQ ASAFLLGFSL LSTKRKMKSC KKSDTLERKI VEKNRRIQMK 60 ALCFKLVSLT TPKSTIDYIL DISPKTDQLD DAAEYIKELR KRIDDLQRNK NEMNHGGEQE 120 YISTNSISSS CSSSSTSTMT DKNLSGATLP ILEVKDFETA MVVLVVTGLN KNFMLYQLIT 180 VLEEHGAEVV NASFPTVNDK IFHTIHSQVR CSRLGVDTSK ICEGLKKLVY A |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G20970.1 | 1e-20 | bHLH family protein |