PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026427902.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

AP2

Protein Properties

Length: 516aa MW: 56739.1 Da PI: 7.6592

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026427902.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.4	6.6e-17	214	263	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_026427902.1 214 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 263 78*****************......55**********************997 PP
2	AP2	37.9	4.5e-12	306	356	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+ eAa+a+++a+ k +g XP_026427902.1 306 SKYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDNGIEAARAYDKAAIKCNG 356 89******.7**5553..2.26********************99776 PP

Sequence ? help Back to Top
Protein Sequence Length: 516 aa Download sequence
MMFDLNVRIT EQVVDCDSEQ VFKVKQQGGC SGKVQQVVID DSSGTSNSSS VVNAETAYSS 60 NGAEEDSCST HNNHDHLSGR NGNGNEILAL DFGILNKDVD VIVNRVETGD SRDDDLAGNL 120 SLLQSSFVTK KLFPVSHGDS NGFNLFLPNS ESSIQSHWMD LSSHHRGTVV GAASGGNHHK 180 QEVVMKVIHP PPQQQQQQQP QVKKSRRGPR SRSSQYRGVT FYRRTGRWES HIWDCGKQVY 240 LGGFDTAHAA ARAYDRAAIK FRGVEADINF NLSDYDEDMK QMNNLTKEEF VHILRRHSTG 300 FSRGTSKYRG VTLHKCGRWE ARMGQFLGKK YIYLGLFDNG IEAARAYDKA AIKCNGREAV 360 TNFEPSTYAG EINPKTDEGG TNYNLDLNLG MSTPSSADGR RCGSNMIGYF PFSTHDAKRA 420 RMENPVAAAL CVQTPNGQVM SSEHPAFWTG IPPNFFVNYE GGTIGRRVDV DLPRLASQSM 480 QLHGSFVPTA TMPLFAAAAS SGFSSSATIP PNTNRI

Sequence ? help Back to Top

Protein Sequence Length: 516 aa Download sequence

MMFDLNVRIT EQVVDCDSEQ VFKVKQQGGC SGKVQQVVID DSSGTSNSSS VVNAETAYSS  60
NGAEEDSCST HNNHDHLSGR NGNGNEILAL DFGILNKDVD VIVNRVETGD SRDDDLAGNL  120
SLLQSSFVTK KLFPVSHGDS NGFNLFLPNS ESSIQSHWMD LSSHHRGTVV GAASGGNHHK  180
QEVVMKVIHP PPQQQQQQQP QVKKSRRGPR SRSSQYRGVT FYRRTGRWES HIWDCGKQVY  240
LGGFDTAHAA ARAYDRAAIK FRGVEADINF NLSDYDEDMK QMNNLTKEEF VHILRRHSTG  300
FSRGTSKYRG VTLHKCGRWE ARMGQFLGKK YIYLGLFDNG IEAARAYDKA AIKCNGREAV  360
TNFEPSTYAG EINPKTDEGG TNYNLDLNLG MSTPSSADGR RCGSNMIGYF PFSTHDAKRA  420
RMENPVAAAL CVQTPNGQVM SSEHPAFWTG IPPNFFVNYE GGTIGRRVDV DLPRLASQSM  480
QLHGSFVPTA TMPLFAAAAS SGFSSSATIP PNTNRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.3	5e-99	AP2 family protein